ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9Y134_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9Y134_F1_nD5

Q9Y134_F1_nD5

UID: 003414133

AlphaFold

Range: 616-670,786-855
AlphaFold: AF-Q9Y134
UniProt: Q9Y134 (all domains)
Gene: Mtr4

Protein: RNA helicase (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in Mtr4-like, beta-barrel domain / Exosome RNA helicase MTR4-like, stalk →

Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamilyMtr4-like, beta-barrel domain / Exosome RNA helicase MTR4-like, stalk(3324.1.1.2)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

PF21408MTR4-like_stalk

Exosome RNA helicase MTR4-like, stalk

External Links

AlphaFold DB: Q9Y134 UniProt: Q9Y134

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 616-670,786-855