ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VFC4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VFC4_F1_nD2

Q9VFC4_F1_nD2

UID: 003414316

AlphaFold

Range: 1-15,51-75,266-620,681-945,981-1175,1216-1255
AlphaFold: AF-Q9VFC4
UniProt: Q9VFC4 (all domains)
Gene: Kpc1

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in TPR_RNF123 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_RNF123(109.4.1.1557)

Pfam Families

PF25576TPR_RNF123

RNF123-like, TPR repeat

ClanCL0020TPR

External Links

AlphaFold DB: Q9VFC4 UniProt: Q9VFC4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-15,51-75,266-620,681-945,981-1175,1216-1255