ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VNP8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9VNP8_F1_nD3

Q9VNP8_F1_nD3

UID: 003415088

AlphaFold

Range: 36-55,321-405
AlphaFold: AF-Q9VNP8
UniProt: Q9VNP8 (all domains)
Gene: Ssl1

Protein: General transcription factor IIH subunit

3D Structure

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Related Domains

Browse other domains in C1_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_4(376.1.2.3)

Pfam Families

TFIIH C1-like domain

ClanCL0229RING

External Links

AlphaFold DB: Q9VNP8 UniProt: Q9VNP8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-55,321-405