ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VL24_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9VL24_F1_nD3

Q9VL24_F1_nD3

UID: 003415300

AlphaFold

Range: 381-620,816-1270
AlphaFold: AF-Q9VL24
UniProt: Q9VL24 (all domains)
Gene: Npc1a

Protein: Niemann-Pick type C-1a, isoform A (Niemann-Pick type C-1a, isoform B) (Niemann-Pick type C-1a, isoform C) (Niemann-Pick type C-1a, isoform D)

3D Structure

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Related Domains

Browse other domains in NPC1_MLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyNPC1_MLD(304.28.1.5)

Pfam Families

PF22314NPC1_MLD

NPC1, middle luminal domain

ClanCL0322RND_permease

External Links

AlphaFold DB: Q9VL24 UniProt: Q9VL24

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-620,816-1270