ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VW09_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9VW09_F1_nD5

Q9VW09_F1_nD5

UID: 003415735

AlphaFold

Range: 1596-1690
AlphaFold: AF-Q9VW09
UniProt: Q9VW09 (all domains)
Gene: Ltn1

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (Listerin E3 ubiquitin protein ligase 1) (RING-type E3 ubiquitin transferase listerin)

3D Structure

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Related Domains

Browse other domains in UBC_like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUBC_like(216.1.1.20)

Pfam Families

PF23009UBC_like

Ubiquitin conjugating domain-like

ClanCL0208UBC

External Links

AlphaFold DB: Q9VW09 UniProt: Q9VW09

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1596-1690