ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VW09_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9VW09_F1_nD1

Q9VW09_F1_nD1

UID: 003415736

AlphaFold

Range: 31-340
AlphaFold: AF-Q9VW09
UniProt: Q9VW09 (all domains)
Gene: Ltn1

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (Listerin E3 ubiquitin protein ligase 1) (RING-type E3 ubiquitin transferase listerin)

3D Structure

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Related Domains

Browse other domains in Ltn1_1st →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyLtn1_1st(109.4.1.299)

Pfam Families

PF22958Ltn1_1st

E3 ubiquitin-protein ligase listerin, N-terminal domain

ClanCL0020TPR

External Links

AlphaFold DB: Q9VW09 UniProt: Q9VW09

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-340