ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q86BY9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q86BY9_F1_nD2

Q86BY9_F1_nD2

UID: 003417030

AlphaFold

Range: 1-10,566-870
AlphaFold: AF-Q86BY9
UniProt: Q86BY9 (all domains)
Gene: rig

Protein: Gem-associated protein 5 (Gemin5) (Protein rigor mortis)

3D Structure

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Related Domains

Browse other domains in WD40, ANAPC4_WD40, Beta-prop_RIG_2nd →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, ANAPC4_WD40, Beta-prop_RIG_2nd(5.1.4.285)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF12894ANAPC4_WD40

Anaphase-promoting complex subunit 4 WD40 domain

ClanCL0186Beta_propeller

PF23775Beta-prop_RIG_2nd

RIG second beta-propeller

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q86BY9 UniProt: Q86BY9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-10,566-870