ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8H8N3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8H8N3_F1_nD2

Q8H8N3_F1_nD2

UID: 003417717

AlphaFold

Range: 46-210
AlphaFold: AF-Q8H8N3
UniProt: Q8H8N3 (all domains)
Gene: TYW1

Protein: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (EC 4.1.3.44) (tRNA wybutosine-synthesizing protein 1 homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Flavodoxin_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_1(2007.2.1.1)

Pfam Families

PF00258Flavodoxin_1

Flavodoxin

ClanCL0042Flavoprotein

External Links

AlphaFold DB: Q8H8N3 UniProt: Q8H8N3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-210