ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

B9FNL5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/B9FNL5_F1_nD3

B9FNL5_F1_nD3

UID: 003417765

AlphaFold

Range: 306-615
AlphaFold: AF-B9FNL5
UniProt: B9FNL5 (all domains)
Gene: Os05g0274200

Protein: DNA mismatch repair protein MSH2 (DNA mismatch repair protein Msh2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in MutS_IV, MutS_III →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupDNA repair protein MutS, domain III(601.23)

TT-groupDNA repair protein MutS, domain III(601.23.1)

FFamilyMutS_IV, MutS_III(601.23.1.4)

Pfam Families

PF05190MutS_IV

MutS family domain IV

PF05192MutS_III

MutS domain III

External Links

AlphaFold DB: B9FNL5 UniProt: B9FNL5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-615