ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5Z7N3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5Z7N3_F1_nD1

Q5Z7N3_F1_nD1

UID: 003417843

AlphaFold

Range: 36-115
AlphaFold: AF-Q5Z7N3
UniProt: Q5Z7N3 (all domains)
Gene: Os06g0728000

Protein: HMG protein (High mobility group protein) (Os06g0728000 protein) (cDNA clone:001-047-C12, full insert sequence)

3D Structure

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Related Domains

Browse other domains in HMG_box →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box(190.1.1.1)

Pfam Families

PF00505HMG_box

HMG (high mobility group) box

ClanCL0114HMG-box

External Links

AlphaFold DB: Q5Z7N3 UniProt: Q5Z7N3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-115