ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q53KE9_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q53KE9_F1_nD5

Q53KE9_F1_nD5

UID: 003418532

AlphaFold

Range: 626-675
AlphaFold: AF-Q53KE9
UniProt: Q53KE9 (all domains)
Gene: LOC_Os11g12650

Protein: Os11g0234200 protein (PHD-finger family protein, expressed) (cDNA clone:001-124-H10, full insert sequence)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q53KE9 UniProt: Q53KE9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 626-675