ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q0JEM0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0JEM0_F1_nD2

Q0JEM0_F1_nD2

UID: 003418619

AlphaFold

Range: 66-165,246-358
AlphaFold: AF-Q0JEM0
UniProt: Q0JEM0 (all domains)
Gene: Os04g0244500

Protein: Os04g0244500 protein (cDNA clone:J013047P15, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Methyltrn_RNA_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrn_RNA_3(2488.1.1.6)

Pfam Families

PF02598Methyltrn_RNA_3

Putative RNA methyltransferase

ClanCL0098SPOUT

External Links

AlphaFold DB: Q0JEM0 UniProt: Q0JEM0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-165,246-358