ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6YSA1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6YSA1_F1_nD2

Q6YSA1_F1_nD2

UID: 003419799

AlphaFold

Range: 106-165
AlphaFold: AF-Q6YSA1
UniProt: Q6YSA1 (all domains)
Gene: Os08g0467100

Protein: Os08g0467100 protein (cDNA clone:002-116-B04, full insert sequence)

3D Structure

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Related Domains

Browse other domains in C2CH-3rd_BIRD-IDD, C2H2-2nd_BIRD-IDD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyC2CH-3rd_BIRD-IDD, C2H2-2nd_BIRD-IDD(386.1.1.235)

Pfam Families

PF22995C2CH-3rd_BIRD-IDD

BIRD-IDD transcription factor, third C2HC zinc finger

ClanCL0361C2H2-zf

PF22996C2H2-2nd_BIRD-IDD

BIRD-IDD transcription factor, second C2H2 zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: Q6YSA1 UniProt: Q6YSA1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-165