ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0J6N8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0J6N8_F1_nD1

Q0J6N8_F1_nD1

UID: 003420754

AlphaFold

Range: 36-135
AlphaFold: AF-Q0J6N8
UniProt: Q0J6N8 (all domains)
Gene: Os08g0290500

Protein: Os08g0290500 protein

3D Structure

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Related Domains

Browse other domains in zf-HC5HC2H_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyzf-HC5HC2H_2(376.1.3.11)

Pfam Families

PF13832zf-HC5HC2H_2

PHD-zinc-finger like domain

ClanCL0229RING

External Links

AlphaFold DB: Q0J6N8 UniProt: Q0J6N8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-135