ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q0J8Q8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0J8Q8_F1_nD1

Q0J8Q8_F1_nD1

UID: 003420868

AlphaFold

Range: 6-115
AlphaFold: AF-Q0J8Q8
UniProt: Q0J8Q8 (all domains)
Gene: Os04g0692100

Protein: Os04g0692100 protein

3D Structure

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Related Domains

Browse other domains in Ubiquitin_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_2(221.1.1.52)

Pfam Families

PF14560Ubiquitin_2

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q0J8Q8 UniProt: Q0J8Q8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115