ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q6YYV1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6YYV1_F1_nD2

Q6YYV1_F1_nD2

UID: 003422702

AlphaFold

Range: 121-215
AlphaFold: AF-Q6YYV1
UniProt: Q6YYV1 (all domains)
Gene: Os09g0115400

Protein: Polyadenylate-binding protein (PABP)

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q6YYV1 UniProt: Q6YYV1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-215