ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9FNU4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9FNU4_F1_nD1

Q9FNU4_F1_nD1

UID: 003422999

AlphaFold

Range: 6-75
AlphaFold: AF-Q9FNU4
UniProt: Q9FNU4 (all domains)
Gene: LOC_Os03g54770

Protein: Cleavage stimulation factor 50 kDa subunit

3D Structure

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Related Domains

Browse other domains in LisH_CTF50 →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupLis-homology dimerization domain(558)

HH-groupLis-homology dimerization domain(558.1)

TT-groupLis-homology dimerization domain(558.1.1)

FFamilyLisH_CTF50(558.1.1.28)

Pfam Families

PF29040LisH_CTF50

CTF50, LisH domain

ClanCL0561LisH

External Links

AlphaFold DB: Q9FNU4 UniProt: Q9FNU4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-75