ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q0JHK0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0JHK0_F1_nD2

Q0JHK0_F1_nD2

UID: 003423992

AlphaFold

Range: 262-320
AlphaFold: AF-Q0JHK0
UniProt: Q0JHK0 (all domains)
Gene: Os01g0859100

Protein: Os01g0859100 protein (cDNA clone:002-107-G07, full insert sequence)

3D Structure

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Related Domains

Browse other domains in C2CH-3rd_BIRD-IDD, zf-C2H2_STOP2_3rd →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyC2CH-3rd_BIRD-IDD, zf-C2H2_STOP2_3rd(386.1.1.239)

Pfam Families

PF22995C2CH-3rd_BIRD-IDD

BIRD-IDD transcription factor, third C2HC zinc finger

ClanCL0361C2H2-zf

PF23115zf-C2H2_STOP2_3rd

STOP2-like, C2H2-type zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: Q0JHK0 UniProt: Q0JHK0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 262-320