ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0P0XWD3_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A0P0XWD3_F1_nD5

A0A0P0XWD3_F1_nD5

UID: 003424836

AlphaFold

Range: 76-85,701-890
AlphaFold: AF-A0A0P0XWD3
UniProt: A0A0P0XWD3 (all domains)
Gene: Os10g0506200

Protein: Valine--tRNA ligase, mitochondrial (EC 6.1.1.9) (Valyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: A0A0P0XWD3 UniProt: A0A0P0XWD3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-85,701-890