ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0P0X9C1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0P0X9C1_F1_nD2

A0A0P0X9C1_F1_nD2

UID: 003425146

AlphaFold

Range: 211-260
AlphaFold: AF-A0A0P0X9C1
UniProt: A0A0P0X9C1 (all domains)
Gene: Os07g0626900

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_3 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_3(376.1.1.22)

Pfam Families

PF13920zf-C3HC4_3

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

AlphaFold DB: A0A0P0X9C1 UniProt: A0A0P0X9C1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-260