ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0P0X9C1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0P0X9C1_F1_nD1

A0A0P0X9C1_F1_nD1

UID: 003425147

AlphaFold

Range: 1-195
AlphaFold: AF-A0A0P0X9C1
UniProt: A0A0P0X9C1 (all domains)
Gene: Os07g0626900

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in TPR_RNF123 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_RNF123(109.4.1.1557)

Pfam Families

PF25576TPR_RNF123

RNF123-like, TPR repeat

ClanCL0020TPR

External Links

AlphaFold DB: A0A0P0X9C1 UniProt: A0A0P0X9C1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-195