ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5ZBX1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5ZBX1_F1_nD1

Q5ZBX1_F1_nD1

UID: 003425186

AlphaFold

Range: 6-115
AlphaFold: AF-Q5ZBX1
UniProt: Q5ZBX1 (all domains)
Gene: Os01g0358400

Protein: 40S ribosomal protein S4

3D Structure

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Related Domains

Browse other domains in S4,RS4NT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyS4,RS4NT(221.1.2.6)

Pfam Families

S4 domain

ClanCL0492S4

RS4NT (NUC023) domain

External Links

AlphaFold DB: Q5ZBX1 UniProt: Q5ZBX1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115