ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vqgB1 - ECOD Domain | ECOD

ECOD/Domains/e2vqgB1

e2vqgB1

UID: 000342523

PDB

Range: B:11-87
PDB: 2VQG chain B(all domains)
UniProt: Q8NRS3 (all domains)
Gene: porB

Molecule: UNCHARACTERIZED PROTEIN CGL0972

3D Structure

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Related Domains

Browse other domains in PorB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPorin B (PorB)(3520)

HH-groupPorin B (PorB)(3520.1)

TT-groupPorin B (PorB)(3520.1.1)

FFamilyPorB(3520.1.1.1)

Ligands

in contact, ≤ 4 Å

3,6,9,12,15,18,21,24,27-nonaoxaheptatriacontan-1-olGVT
(4R)-2-METHYLPENTANE-2,4-DIOLMRD
Zinc ionZN

Pfam Families

Alpha helical Porin B

External Links

ECOD PDB View: 2VQG RCSB PDB: 2VQG PDBe: 2VQG UniProt: Q8NRS3

Downloads

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metal

+ 2 additives (Acetate, Cacodylate ion)

AcetateACT
DrugBank DB14511
Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.