ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6Z8N1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q6Z8N1_F1_nD4

Q6Z8N1_F1_nD4

UID: 003426935

AlphaFold

Range: 246-385
AlphaFold: AF-Q6Z8N1
UniProt: Q6Z8N1 (all domains)
Gene: Os08g0513300

Protein: Os08g0513300 protein (cDNA clone:J013162F01, full insert sequence)

3D Structure

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Related Domains

Browse other domains in MRP-S28 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupPeptidyl-tRNA hydrolase domain-like(330.3)

TT-groupPeptidyl-tRNA hydrolase domain-like(330.3.1)

FFamilyMRP-S28(330.3.1.2)

Pfam Families

PF10213MRP-S28

Mitochondrial ribosomal subunit protein

ClanCL0337RF

External Links

AlphaFold DB: Q6Z8N1 UniProt: Q6Z8N1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-385