ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5JKQ7_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5JKQ7_F1_nD3

Q5JKQ7_F1_nD3

UID: 003426989

AlphaFold

Range: 401-645
AlphaFold: AF-Q5JKQ7
UniProt: Q5JKQ7 (all domains)
Gene: Os01g0559500

Protein: Os01g0559500 protein

3D Structure

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Related Domains

Browse other domains in PPR repeat family / Pentatricopeptide repeat domain →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR repeat family / Pentatricopeptide repeat domain(109.4.1.775)

Pfam Families

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q5JKQ7 UniProt: Q5JKQ7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-645