ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0JCJ0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0JCJ0_F1_nD1

Q0JCJ0_F1_nD1

UID: 003427050

AlphaFold

Range: 26-720
AlphaFold: AF-Q0JCJ0
UniProt: Q0JCJ0 (all domains)
Gene: Os04g0466700

Protein: Os04g0466700 protein

3D Structure

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Related Domains

Browse other domains in Ipi1_N, TPR_TEX10 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyIpi1_N, TPR_TEX10(109.4.1.1913)

Pfam Families

Rix1 complex component involved in 60S ribosome maturation

ClanCL0020TPR

PF25781TPR_TEX10

TEX10-like, TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: Q0JCJ0 UniProt: Q0JCJ0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-720