ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pygB1 - ECOD Domain | ECOD

ECOD/Domains/e2pygB1

e2pygB1

UID: 000342773

PDB

Range: B:2-377
PDB: 2PYG chain B(all domains)
UniProt: Q44493 (all domains)
Gene: algE4

Molecule: Mannuronan C5-epimerase AlgE4 (EC 5.1.3.37) (Poly(beta-D-mannuronate) C5 epimerase 4)

3D Structure

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Related Domains

Browse other domains in NosD, Pect-lyase_RHGA_epim, Beta_helix →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyNosD, Pect-lyase_RHGA_epim, Beta_helix(207.2.1.76)

Pfam Families

Periplasmic copper-binding protein (NosD)

ClanCL0268Pec_lyase-like

PF12708Pect-lyase_RHGA_epim

Rhamnogalacturonase A/epimerase, pectate lyase-like

ClanCL0268Pec_lyase-like

PF13229Beta_helix

Right handed beta helix region

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 2PYG RCSB PDB: 2PYG PDBe: 2PYG UniProt: Q44493

Downloads

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