ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5QMN4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5QMN4_F1_nD3

Q5QMN4_F1_nD3

UID: 003429811

AlphaFold

Range: 526-580,606-695
AlphaFold: AF-Q5QMN4
UniProt: Q5QMN4 (all domains)
Gene: RDR4

Protein: Probable RNA-dependent RNA polymerase 4 (OsRDR4) (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RdRP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRdRP(1.1.2.11)

Pfam Families

RNA dependent RNA polymerase

External Links

AlphaFold DB: Q5QMN4 UniProt: Q5QMN4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 526-580,606-695