ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5QMN4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5QMN4_F1_nD5

Q5QMN4_F1_nD5

UID: 003429813

RepresentativeAlphaFold

Range: 696-785,901-1175
AlphaFold: AF-Q5QMN4
UniProt: Q5QMN4 (all domains)
Gene: RDR4

Protein: Probable RNA-dependent RNA polymerase 4 (OsRDR4) (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RdRP, RdRP_head →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP, RdRP_head(3588.1.1.2)

Pfam Families

RNA dependent RNA polymerase

PF26253RdRP_head

RdRP, head domain

External Links

AlphaFold DB: Q5QMN4 UniProt: Q5QMN4

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 696-785,901-1175