ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JL96_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5JL96_F1_nD4

Q5JL96_F1_nD4

UID: 003429847

AlphaFold

Range: 266-300
AlphaFold: AF-Q5JL96
UniProt: Q5JL96 (all domains)
Gene: RZFP34

Protein: Probable E3 ubiquitin-protein ligase RZFP34 (EC 2.3.2.27) (OsRFP1) (RING zinc-finger protein 34) (OsRZFP34)

3D Structure

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Related Domains

Browse other domains in zinc_ribbon_6 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzinc_ribbon_6(375.1.1.52)

Pfam Families

PF14599zinc_ribbon_6

Zinc-ribbon

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q5JL96 UniProt: Q5JL96

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-300