ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q0J0K9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0J0K9_F1_nD2

Q0J0K9_F1_nD2

UID: 003430708

AlphaFold

Range: 148-215
AlphaFold: AF-Q0J0K9
UniProt: Q0J0K9 (all domains)
Gene: Os09g0494300

Protein: Os09g0494300 protein (cDNA clone:J033034D09, full insert sequence)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupMethyl-CpG-binding domain, MBD(252.1)

TT-groupMethyl-CpG-binding domain, MBD(252.1.1)

FFamilyMBD(252.1.1.1)

Pfam Families

Methyl-CpG binding domain

ClanCL0081MBD-like

External Links

AlphaFold DB: Q0J0K9 UniProt: Q0J0K9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 148-215