ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JJU2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5JJU2_F1_nD4

Q5JJU2_F1_nD4

UID: 003432348

AlphaFold

Range: 476-605
AlphaFold: AF-Q5JJU2
UniProt: Q5JJU2 (all domains)
Gene: Os01g0956600

Protein: Os01g0956600 protein (cDNA clone:J033112L14, full insert sequence)

3D Structure

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Related Domains

Browse other domains in DUF8489 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyDUF8489(304.9.1.106)

Pfam Families

PF28977DUF8489

Domain of unknown function (DUF8489)

ClanCL0221RRM

External Links

AlphaFold DB: Q5JJU2 UniProt: Q5JJU2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 476-605