ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8LIB1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8LIB1_F1_nD4

Q8LIB1_F1_nD4

UID: 003434213

AlphaFold

Range: 381-605
UniProt: Q8LIB1 (all domains)
Gene: Os07g0644300

Protein: Pre-mRNA-splicing factor SYF1 (Pre-mRNA-splicing factor syf1)

3D Structure

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Related Domains

Browse other domains in TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C(109.4.1.1796)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

PF23220HAT_Syf1_M

Pre-mRNA-splicing factor SYF1 middle HAT repeat

ClanCL0020TPR

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

External Links

UniProt: Q8LIB1

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