ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JM78_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JM78_F1_nD1

Q5JM78_F1_nD1

UID: 003435931

AlphaFold

Range: 76-315
AlphaFold: AF-Q5JM78
UniProt: Q5JM78 (all domains)
Gene: Os01g0732200

Protein: Os01g0732200 protein (cDNA clone:J013111I12, full insert sequence)

3D Structure

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Related Domains

Browse other domains in MMR_HSR1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1(2004.1.1.73)

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5JM78 UniProt: Q5JM78

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-315