ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5QMN5_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5QMN5_F1_nD5

Q5QMN5_F1_nD5

UID: 003436808

AlphaFold

Range: 676-770,881-1140
AlphaFold: AF-Q5QMN5
UniProt: Q5QMN5 (all domains)
Gene: RDR3

Protein: Probable RNA-dependent RNA polymerase 3 (OsRDR3) (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RdRP, RdRP_head →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP, RdRP_head(3588.1.1.2)

Pfam Families

RNA dependent RNA polymerase

PF26253RdRP_head

RdRP, head domain

External Links

AlphaFold DB: Q5QMN5 UniProt: Q5QMN5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 676-770,881-1140