ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8W342_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q8W342_F1_nD5

Q8W342_F1_nD5

UID: 003437293

AlphaFold

Range: 636-685
AlphaFold: AF-Q8W342
UniProt: Q8W342 (all domains)
Gene: LOC_Os03g50780

Protein: Os03g0716200 protein (PHD-finger family protein, expressed)

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q8W342 UniProt: Q8W342

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 636-685