ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0J8A6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q0J8A6_F1_nD4

Q0J8A6_F1_nD4

UID: 003437525

AlphaFold

Range: 491-535
UniProt: Q0J8A6 (all domains)
Gene: Os08g0125300

Protein: Os08g0125300 protein (cDNA clone:J023104P21, full insert sequence)

3D Structure

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Related Domains

Browse other domains in gag_pre-integrs →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilygag_pre-integrs(101.1.1.108)

Pfam Families

PF13976gag_pre-integrs

GAG-pre-integrase domain

External Links

UniProt: Q0J8A6

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