ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84ZL5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q84ZL5_F1_nD1

Q84ZL5_F1_nD1

UID: 003439951

AlphaFold

Range: 386-470
AlphaFold: AF-Q84ZL5
UniProt: Q84ZL5 (all domains)
Gene: Os08g0154600

Protein: DNA topoisomerase I (EC 5.6.2.1) (DNA topoisomerase 1)

3D Structure

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Related Domains

Browse other domains in Topoisom_I_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057)

HH-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1)

TT-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1.1)

FFamilyTopoisom_I_N(4057.1.1.1)

Pfam Families

PF02919Topoisom_I_N

Eukaryotic DNA topoisomerase I, DNA binding fragment

External Links

AlphaFold DB: Q84ZL5 UniProt: Q84ZL5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 386-470