ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5N945_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5N945_F1_nD1

Q5N945_F1_nD1

UID: 003439975

AlphaFold

Range: 6-115
AlphaFold: AF-Q5N945
UniProt: Q5N945 (all domains)
Gene: Os01g0869500

Protein: Os01g0869500 protein (cDNA clone:002-114-G03, full insert sequence) (cDNA clone:J023054D19, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Plant_NMP1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupCH domain-like(193)

HH-groupCalponin-homology domain-like(193.1)

TT-groupCalponin-homology domain-like(193.1.1)

FFamilyPlant_NMP1(193.1.1.37)

Pfam Families

PF06694Plant_NMP1

Plant nuclear matrix protein 1 (NMP1)

External Links

AlphaFold DB: Q5N945 UniProt: Q5N945

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115