ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5VMF2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5VMF2_F1_nD4

Q5VMF2_F1_nD4

UID: 003442308

AlphaFold

Range: 741-810
AlphaFold: AF-Q5VMF2
UniProt: Q5VMF2 (all domains)
Gene: Os06g0101000

Protein: Os06g0101000 protein

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q5VMF2 UniProt: Q5VMF2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 741-810