ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8LJG8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8LJG8_F1_nD4

Q8LJG8_F1_nD4

UID: 003443294

AlphaFold

Range: 511-615
AlphaFold: AF-Q8LJG8
UniProt: Q8LJG8 (all domains)
Gene: Os01g0877500

Protein: Os01g0877500 protein (cDNA clone:J033023G11, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_At1g33420 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_At1g33420(221.1.1.167)

Pfam Families

PF25565Ubiquitin_At1g33420

At1g33420-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q8LJG8 UniProt: Q8LJG8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 511-615