ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8LJG8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8LJG8_F1_nD3

Q8LJG8_F1_nD3

UID: 003443296

AlphaFold

Range: 356-440
AlphaFold: AF-Q8LJG8
UniProt: Q8LJG8 (all domains)
Gene: Os01g0877500

Protein: Os01g0877500 protein (cDNA clone:J033023G11, full insert sequence)

3D Structure

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Related Domains

Browse other domains in WHD_plant_repro →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyWHD_plant_repro(101.1.2.497)

Pfam Families

PF25874WHD_plant_repro

Winged helix-turn-helix domain in plant reproductive proteins

ClanCL0123HTH

External Links

AlphaFold DB: Q8LJG8 UniProt: Q8LJG8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 356-440