ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8LJG8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q8LJG8_F1_nD5

Q8LJG8_F1_nD5

UID: 003443310

AlphaFold

Range: 621-665
AlphaFold: AF-Q8LJG8
UniProt: Q8LJG8 (all domains)
Gene: Os01g0877500

Protein: Os01g0877500 protein (cDNA clone:J033023G11, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q8LJG8 UniProt: Q8LJG8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 621-665