ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8LNU2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8LNU2_F1_nD2

Q8LNU2_F1_nD2

UID: 003444703

AlphaFold

Range: 376-725
AlphaFold: AF-Q8LNU2
UniProt: Q8LNU2 (all domains)
Gene: LOC_Os10g35250

Protein: Hydroxyproline-rich glycoprotein family protein, putative, expressed (Os10g0495300 protein)

3D Structure

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Related Domains

Browse other domains in ALIX_LYPXL_bnd →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupAlix V domain(3285)

HH-groupAlix V domain(3285.1)

TT-groupAlix V domain(3285.1.1)

FFamilyALIX_LYPXL_bnd(3285.1.1.1)

Pfam Families

PF13949ALIX_LYPXL_bnd

ALIX V-shaped domain binding to HIV

External Links

AlphaFold DB: Q8LNU2 UniProt: Q8LNU2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-725