ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q53KE9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q53KE9_F1_nD3

Q53KE9_F1_nD3

UID: 003445899

AlphaFold

Range: 366-445
AlphaFold: AF-Q53KE9
UniProt: Q53KE9 (all domains)
Gene: LOC_Os11g12650

Protein: Os11g0234200 protein (PHD-finger family protein, expressed) (cDNA clone:001-124-H10, full insert sequence)

3D Structure

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Related Domains

Browse other domains in WHD_plant_repro →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyWHD_plant_repro(101.1.2.497)

Pfam Families

PF25874WHD_plant_repro

Winged helix-turn-helix domain in plant reproductive proteins

ClanCL0123HTH

External Links

AlphaFold DB: Q53KE9 UniProt: Q53KE9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 366-445