ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84LM2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q84LM2_F1_nD1

Q84LM2_F1_nD1

UID: 003446608

AlphaFold

Range: 51-345
AlphaFold: AF-Q84LM2
UniProt: Q84LM2 (all domains)
Gene: VPE1

Protein: Vacuolar-processing enzyme beta-isozyme 1 (Beta-VPE 1) (OsVPE1) (EC 3.4.22.34) (Asparaginyl endopeptidase VPE1)

3D Structure

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Related Domains

Browse other domains in Peptidase_C13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C13(7575.1.1.3)

Pfam Families

PF01650Peptidase_C13

Peptidase C13 family

ClanCL0093Peptidase_CD

External Links

AlphaFold DB: Q84LM2 UniProt: Q84LM2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-345