ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5WMY1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5WMY1_F1_nD2

Q5WMY1_F1_nD2

UID: 003448537

AlphaFold

Range: 171-260
AlphaFold: AF-Q5WMY1
UniProt: Q5WMY1 (all domains)
Gene: Os05g0155300

Protein: Os05g0155300 protein (cDNA clone:J023010L13, full insert sequence)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupFe-S cluster assembly (FSCA) domain-like(327.6)

TT-groupFe-S cluster assembly (FSCA) domain-like(327.6.1)

FFamilyNifU(327.6.1.1)

Pfam Families

NifU-like domain

ClanCL0232NifU

External Links

AlphaFold DB: Q5WMY1 UniProt: Q5WMY1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-260