ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q0JPV9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0JPV9_F1_nD1

Q0JPV9_F1_nD1

UID: 003448964

AlphaFold

Range: 16-80
AlphaFold: AF-Q0JPV9
UniProt: Q0JPV9 (all domains)
Gene: Os01g0198100

Protein: RNA-dependent RNA polymerase (EC 2.7.7.48)

3D Structure

Loading viewer...

Related Domains

Browse other domains in 4HB_RdRP3_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938)

HH-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1)

TT-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1.1)

FFamily4HB_RdRP3_N(3938.1.1.2)

Pfam Families

PF262494HB_RdRP3_N

RdRP3/4/5, N-terminal four helical bundle domain

External Links

AlphaFold DB: Q0JPV9 UniProt: Q0JPV9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-80