ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VMY4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VMY4_F1_nD1

Q5VMY4_F1_nD1

UID: 003448994

AlphaFold

Range: 291-425
AlphaFold: AF-Q5VMY4
UniProt: Q5VMY4 (all domains)
Gene: Os06g0281400

Protein: DNA topoisomerase (EC 5.6.2.1)

3D Structure

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Related Domains

Browse other domains in Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyToprim(2006.1.3.2)

Pfam Families

Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: Q5VMY4 UniProt: Q5VMY4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-425