ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VPH3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VPH3_F1_nD1

Q5VPH3_F1_nD1

UID: 003449633

AlphaFold

Range: 46-155
AlphaFold: AF-Q5VPH3
UniProt: Q5VPH3 (all domains)
Gene: Os06g0137600

Protein: Os06g0137600 protein (cDNA clone:006-204-C10, full insert sequence) (cDNA clone:J013092J10, full insert sequence) (cDNA clone:J013166G10, full insert sequence)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRibosome-binding factor A (RbfA)-related(327.10)

TT-groupRibosome-binding factor A (RbfA)-related(327.10.1)

FFamilyRBFA(327.10.1.2)

Pfam Families

Ribosome-binding factor A

ClanCL0494DnaA_N

External Links

AlphaFold DB: Q5VPH3 UniProt: Q5VPH3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-155